Centers

Center for Marine Functional Genomic Studies

Center for Membrane Toxicity Studies

Bioinformatics

Comparative Toxicogenomics Database

Shark, Skate, and Lobster ESTs

Resources

Seminars

Research Species

Investigators

David Barnes
James Coffman
George Kidder
Carolyn Mattingly
Antonio Planchart
Denry Sato
David Towle

Seasonal Investigators

Publications

Funding Opportunities

Seasonal Research Opportunities

Laboratory Space

Electronic Research Resources

Information for Families

Philanthropy

Publications

updated November 21, 2007

Peer-reviewed publications of research conducted at the MDI Biological Laboratory. MDIBL principal investigators are in bold. Graduate, undergradute and high school students are marked with an asterisk (*).

2004 | 2005 | 2006

2006

Abouhamed M, Gburek J, Liu W, Torchalski B, Wilhelm A, Wolff NA, Christensen EI, Thevenod F, Smith CP.  Divalent metal transporter 1 in the kidney proximal tubule is expressed in late endosomes/lysosomal membranes: implications for renal handling of protein-metal complexes. Am J Physiol Renal Physiol. 2006 Jun;290(6):F1525-33. Epub 2006 Jan 31.

Aslamkhan AG, Thompson DM, Perry JL, Bleasby K, Wolff NA, Barros S, Miller DS, Pritchard JB.  The flounder organic anion transporter (fOat) has sequence, function and substrate pecificity similarity to both mammalian Oats 1 and 3. Am J Physiol Regul Integr Comp Physiol. 2006 Jul 20; [Epub ahead of print]

Attene-Ramos MS, Wagner ED, Plewa MJ, Gaskins HR.  Evidence that hydrogen sulfide is a genotoxic agent. Mol Cancer Res. 2006 Jan;4(1):9-14.

Baehr CH, Fricker G, Miller DS.  Fluorescein-methotrexate transport in dogfish shark (Squalus acanthias) choroids plexus. Am J Physiol Regul Integr Comp Physiol. 2006 Aug;291(2):R464-72. Epub 2006 Feb 23.

Ballatori N, Henson JH, Seward DJ, Cai SY, Runnegar M*, Fricker G, Miller DS, Boyer JL.  Retention of structural and functional polarity in cultured skate hepatocytes undergoing in vitro morphogenesis. Comp Biochem Physiol B Biochem Mol Biol. 2006 Jun;144(2):167-79. Epub 2006 Mar 6.

Ballatori, N., Madejczyk, M.S.* Transport of nonessential metals across mammalian cell membranes. Topics in Current Genetics. 2006; 14:455-483.

Bewley, MS*, Pena, JTG, Plesch, FN, Decker, SE*, Weber, GL, Forrest, JN Jr. Shark rectal gland vasoactive intestinal peptide receptor: cloning, functional expression, and regulation of CFTR chloride channels. Am. J. Physiol. Regul Integr Comp Physiol, 2006. 291:R1157-64.

Boyer JL, Trauner M, Mennone A, Soroka CJ, Cai SY, Moustafa T, Zollner G, Lee JY, Ballatori N.  Upregulation of a basolateral FXR-dependent bile acid efflux transporter OSTalpha-OSTbeta in cholestasis in humans and rodents. Am J Physiol Gastrointest Liver Physiol. 2006 Jun;290(6):G1124-30. Epub 2006 Jan19.

Bushmann, P.J., Ailstock, M.S. Antibacterial compounds in estuarine submersed aquatic plants. Journal of Exp. Marine Biology and Ecology. 2006; 331(1):41-50.

Bryson SP, Joyce EM, Martell DJ, Lee LE, Holt SE, Kales SC, Fujiki K, Dixon B, Bols NC.  A Cell Line (HEW) from Embryos of Haddock (Melanogrammus aeglefinius) and Its Capacity to Tolerate Environmental Extremes. Mar Biotechnol (NY). 2006 Aug 18; [Epub ahead of print]

Cai SY, Boyer JL.  FXR: a target for cholestatic syndromes? Expert Opin Ther Targets. 2006 Jun;10(3):409-21. Review.

Catches, J.S.*, Burns, J.M.*, Edwards, S.L. and Claiborne, J.B. Na+/H+ antiporter (NHE2), V-H+-ATPase, and Na+/K+-ATPase immunolocalization in a marine teleost (Myoxocephalus octodecimspinosus). J. Exp. Biol. 2006; 209:3440-3447.

Choe KP, Havird J*, Rose R*, Hyndman K*, Piermarini P, Evans DH.  COX2 in a euryhaline teleost, Fundulus heteroclitus: primary sequence, distribution, localization, and potential function in gills during salinity acclimation. J Exp Biol. 2006 May;209(Pt 9):1696-708.

Coblentz, F.E., Towle, D.W., Shafer, T.H. Expressed sequence tags from normalized cDNA libraries prepared from gill and hypodermal tissues of the blue crab, Callinectes sapidus. Comp. Biochem. Physiol. D Genomics Proteomics. 2006; 1:200-208.

Edwards, S.L., Wall, B.P.*, Morrison-Shetlar, A., Sligh, S.*, Weakley, J.C.*, Evans, D. H., Claiborne, J.B., Eds. (2006). The Physiology of Fishes. Boca Raton, CRC Press.

Genovese G, Senek M*, Ortiz N, Regueira M*, Towle DW, Tresguerres M, Luquet CM.  Dopaminergic regulation of ion transport in gills of the euryhaline semiterrestrial crab Chasmagnathus granulatus: interaction between D1- and D2-like receptors. J Exp Biol. 2006 Jul;209(Pt 14):2785-93.

Gerwick L, Corley-Smith G, Bayne CJ.  Gene transcript changes in individual rainbow trout livers following an inflammatory stimulus. Fish Shellfish Immunol. 2006 Apr 28

Guggino WB, Stanton BA.  New insights into cystic fibrosis: molecular switches that regulate CFTR. Nat Rev Mol Cell Biol. 2006 Jun;7(6):426-36.

Goodall CP, Bender RC, Brooks JK, Bayne CJ.  Biomphalaria glabrata cytosolic copper/zinc superoxide dismutase (SOD1) gene: association of SOD1 alleles with resistance/susceptibility to Schistosoma mansoni. Mol Biochem Parasitol. 2006 Jun;147(2):207-10. Epub 2006 Mar 9.

Haller H, de Groot K, Bahlmann F, Elger M, Fliser D.  Stem cells and progenitor cells in renal disease. Kidney Int. 2005 Nov;68(5):1932-6. Review.

Hartz AM, Bauer B, Fricker G, Miller DS.  Rapid modulation of P-glycoprotein-mediated transport at the blood-brain barrier by tumor necrosis factor-alpha and lipopolysaccharide. Mol Pharmacol. 2006 Feb;69(2):462-70. Epub 2005 Nov 8.

Hegedus T, Aleksandrov A, Cui L, Gentzsch M, Chang XB, Riordan JR.  F508del CFTR with two altered RXR motifs escapes from ER quality control but its channel activity is thermally sensitive. Biochim Biophys Acta. 2006 May;1758(5):565-72. Epub 2006 Mar 31.

Henry RP.  Functional evidence for the presence of a carbonic anhydrase repressor in the eyestalk of the euryhaline green crab Carcinus maenas. J Exp Biol. 2006 Jul;209(Pt 13):2595-605.

Henry RP, Borst DW.  Effects of eyestalk ablation on carbonic anhydrase activity in the euryhaline blue crab Callinectes sapidus: neuroendocrine control of enzyme expression.
J Exp Zoolog A Comp Exp Biol. 2006 Jan 1;305(1):23-31.

Henry RP, Campoverde M*.  Neuroendocrine regulation of carbonic anhydrase expression in the gills of the euryhaline green crab, Carcinus maenas. J Exp Zoolog A Comp Exp Biol. 2006 Aug 1;305(8):663-8.

Henry RP, Thomason KL, Towle DW.  Quantitative changes in branchial carbonic anhydrase activity and expression in the euryhaline green crab, Carcinus maenas, in response to low salinity exposure. J Exp Zoolog A Comp Exp Biol. 2006 May 30

Hyndman KA*, Choe KP, Havird JC*, Rose RE*, Piermarini PM, Evans DH.  Neuronal nitric oxide synthase in the gill of the killifish, Fundulus heteroclitus. Comp Biochem Physiol B Biochem  Mol Biol. 2006 Aug;144(4):510-9. Epub 2006 May 19.

Kidder GW 3rd, Petersen CW, Preston RL.  Energetics of osmoregulation: I. Oxygen consumption by Fundulus heteroclitus. J Exp Zoolog A Comp Exp Biol. 2006 Apr 1;305(4):309-17.

Kidder GW 3rd, Petersen CW, Preston RL.  Energetics of osmoregulation: II. Water flux and osmoregulatory work in the euryhaline fish, Fundulus heteroclitus. J Exp Zoolog A Comp Exp Biol. 2006 Apr 1;305(4):318-27.

Li T, Roer R, Vana M, Pate S, Check J. Gill area, permeability and Na+ ,K+ -ATPase activity as a function of size and salinity in the blue crab, Callinectes sapidus. J Exp Zoolog A Comp Exp Biol. 2006 Mar 1;305(3):233-45.

Linton SM, Greenaway P, Towle DW.  Endogenous production of endo-beta-1,4-glucanase by decapod crustaceans. J Comp Physiol [B]. 2006 May;176(4):339-48. Epub 2006 Jan 12.

Lovett DL, Colella T, Cannon AC, Lee DH, Evangelisto A, Muller EM, Towle DW.  Effect of salinity on osmoregulatory patch epithelia in gills of the blue crab Callinectes sapidus.
Biol Bull. 2006 Apr;210(2):132-9.

Mattingly CJ, Rosenstein MC, Davis AP, Colby GT, Forrest JN Jr, Boyer JL.  The comparative toxicogenomics database: a cross-species resource for building chemical-gene interaction networks. Toxicol Sci. 2006 Aug;92(2):587-95. Epub 2006 May 4.

Palmer ML, Lee SY, Carlson D, Fahrenkrug S, O'Grady SM.  Stable knockdown of CFTR establishes a role for the channel in P2Y receptor-stimulated anion secretion. J Cell Physiol. 2006 Mar;206(3):759-70.

Palmer ML, Lee SY, Maniak PJ, Carlson D, Fahrenkrug SC, O'Grady SM.  Protease-activated receptor regulation of Cl- secretion in Calu-3 cells requires prostaglandin release and CFTR activation. Am J Physiol Cell Physiol. 2006 Apr;290(4):C1189-98.

Pannabecker TL, Dantzler WH. Three-dimensional architecture of inner medullary vasa recta.
Am J Physiol Renal Physiol. 2006 Jun;290(6):F1355-66. Epub 2005 Dec 27.

Peters I, Tossidou I, Achenbach J, Woroniecki R, Mengel M, Park JK, Paschy M, de Groot K, Haller H, Schiffer M.  IGF-binding protein-3 modulates TGF-beta/BMP-signaling in glomerular podocytes. J Am Soc Nephrol. 2006 Jun;17(6):1644-56. Epub 2006 May 3.

Porter ME, Beltran JL, Koob TJ, Summers AP.  Material properties and biochemical composition of mineralized vertebral cartilage in seven elasmobranch species (Chondrichthyes). J Exp Biol. 2006 Aug 1;209(Pt 15):2920-8.

Puffer AB*, Meschter EE, Musch MW, Goldstein L.  Membrane trafficking factors are involved in the hypotonic activation of the taurine channel in the little skate (Raja erinacea) red blood cell. J Exp Zoolog A Comp Exp Biol. 2006 Jul 1;305(7):594-601.

Ratner MA*, Decker SE*, Aller SG*, Weber G, Forrest JN Jr.  Mercury toxicity in the shark (Squalus acanthias) rectal gland: apical CFTR chloride channels are inhibited by mercuric chloride. J Exp Zoolog A Comp Exp Biol. 2006 Mar 1;305(3):259-67.

Ratner, MA*, Decker, SE*, Aller, SG, Weber, GJ, and Forrest, JN Jr. Polarity of mercury toxicity in the shark (Squalus acanthias) rectal gland: apical CFTR chloride channels are inhibited by mercuric chloride. J. Exp. Zool. 305A(3):259-267, 2006.

Robertson AJ, Dickey-Sims C, Ransick A, Rupp DE, McCarthy JJ, Coffman JA. CBFbeta is a facultative Runx partner in the sea urchin embryo. BMC Biol. 2006 Feb 9;4:4.

Shaw JR, Dempsey TD, Chen CY, Hamilton JW, Folt CL.  Comparative toxicity of cadmium, zinc, and mixtures of cadmium and zinc to daphnids. Environ Toxicol Chem. 2006 Jan;25(1):182-9.

Sofyan A, Shaw JR, Birge WJ.  Metal trophic transfer from algae to cladocerans and the relative importance of dietary metal exposure. Environ Toxicol Chem. 2006 Apr;25(4):1034-41.

Stanton CR*, Thibodeau R*, Lankowski A*, Shaw JR, Hamilton JW, Stanton BA.  Arsenic inhibits CFTR-mediated chloride secretion by killifish (Fundulus heteroclitus) opercular membrane. Cell Physiol Biochem. 2006;17(5-6):269-78. Epub 2006 Jun 20.

Su JR, Barnaby R, O'Toole GA, Stanton BA.  Pseudomonas aeruginosa inhibits endocytic recycling of CFTR in polarized human airway epithelial cells. Am J Physiol Cell Physiol. 2006 Mar;290(3):C862-72. Epub 2005 Oct 19.

Swiatecka-Urban A, Moreau-Marquis S, Maceachran DP, Connolly JP, Stanton CR, Toullec JY, Serrano L*, Lopez P, Soyez D, Spanings-Pierrot C.  The crustacean hyperglycemic hormones from an euryhaline crab Pachygrapsus marmoratus and a fresh water crab Potamon ibericum: eyestalk and pericardial isoforms. Peptides. 2006 Jun;27(6):1269-80. Epub 2006 Jan 18.

Towle, D.W., Smith, C.M. Gene discovery in Carcinus maenas and Homarus americanus via expressed sequence tags. Integ. Comp. Biol. 2006; 46: 912-918.

Treberg JR, Crockett EL, Driedzic WR. Activation of Liver Carnitine Palmitoyltransferase-1 and Mitochondrial Acetoacetyl-CoA Thiolase Is Associated with Elevated Ketone Body Levels in the Elasmobranch Squalus acanthias. Physiol Biochem Zool. 2006 Sep-Oct;79(5):899-908. Epub 2006 Aug 18.

Weber GJ, Mehr AP, Sirota JC*, Aller SG, Decker SE*, Dawson DC, Forrest JN Jr.  Mercury and zinc differentially inhibit shark and human CFTR orthologues: involvement of shark cysteine 102. Am J Physiol Cell Physiol. 2006 Mar;290(3):C793-801. Epub 2005 Oct 19.

Wolff NA, Abouhamed M, Verroust PJ, Thevenod F.  Megalin-dependent internalization of cadmium-metallothionein and cytotoxicity in cultured renal proximal tubule cells. J Pharmacol Exp Ther. 2006 Aug;318(2):782-91. Epub 2006 May 11.

Zhang, Y., Schmack, I., Dawson, D.G., Grossniklaus, H.E., Conrad, A.H., Kariya, Y., Suzuki, K., Edelhauser, H.F., Conrad, G.W. Keratan sulfate and chondroitin/dermatan sulfate in maximally recovered hypocellular stromal interface scars of postmortem human LASIK corneas. Invest Ophthalmol Vis Sci. 2006; 47: 2390-2396.


2005

Althoff T*, Hentschel H, Luig J, Schutz H, Kasch M, Kinne RK. Na+-D-glucose cotransporters in the kidney of Squalus acanthias: molecular identification and intrarenal distribution. Am J Physiol Regul Integr Comp Physiol. 2005 Nov 23; [Epub ahead of print] PMID: 16306165.

Ballatori N, Christian WV, Lee JY, Dawson PA, Soroka CJ, Boyer JL, Madejczyk MS*, Li N. OSTalpha-OSTbeta: A major basolateral bile acid and steroid transporter in human intestinal, renal, and biliary epithelia. Hepatology. 2005 Nov 29;42(6): 1270-1279.

Ballatori N. Biology of novel organic solute and steriod transporter, OSTalpha-OSTbeta. Exp Biol Med (Maywood). 2005 Nov;230(10): 689-98.

Beltz BS, Benton JL, Sandeman DC. Adult neurogenesis in the crustacean brain: comparative cell cycle dynamics and regulatory controls. Society for Neuroscience Abstracts. 2005; 31:366.2.

Choe KP, Kato A, Hirose S, Plata C, Sindic A, Romero MF, Claiborne JB, Evans DH. NHE3 in an ancestral vertebrate; primary sequence, distribution, localization, and function in gills. Am J Physiol Regul Integr Comp Physiol. 2005 Nov;289(5): R1520-34.

Congdon CB, Fizer CW*, Smith NW*, Gaskins HR, Aman J*, Nava G*, Mattingly C. Preliminary results for GAMI: A genetic algorithms approach to motif inference. Proceedings of the 2005 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology. 2005: 97-104.

Crockett EL, Hassett RP. A cholesterol-enriched diet enhances egg production and egg viability without altering cholesterol content of biological membranes in the copepod, Acartia hudsonica. Physiol Biochem Zool. 2005 May-Jun;78(3): 424-33.

Dawson PA, Hubbert M, Haywood J, Craddock AL, Zerangue N, Christian WV, Ballatori N. The heteromeric organic solute transporter alpha-beta, OSTalpha-OSTbeta is an ileal basolateral bile acid transporter. J Biol Chem. 2005;280: 6960-6968.

Edwards SL, Wall BP*, Morrison-Shetlar A, Sligh S*, Weakley JC*, Claiborne JB. The effect of environmental hypercapnia and salinity on the expression of NHE-like isoforms in the gills of a euryhaline fish (Fundulus heteroclitus). J Exp Zool A Comp Exp Biol. 2005 Jun 1;303(6): 464-75.

Epstein FH, Epstein JA. A perspective on the value of aquatic models in biomedical research. Exp Biol Med (Maywood). 2005 Jan;230(1): 1-7.

Estes, JA, Lindberg DR, and Wray, CG. Evolution of large body size in Abalones (Haliotis): patterns and implications. 2005, Vol. 31, No. 4: 591-606.

Evans DH, Piermarini PM, Choe KP. The multifunctional fish gill: dominant site of gas exchange, osmoregulation, acid-base regulation, and excretion of nitrogenous waste. Physiol Rev. 2005 Jan;85(1): 97-177.

Fellner SK, Parker L*. Endothelin-1 superoxide and adeninediphosphate ribose cyclase in shark vascular smooth muscle. J Exp Biol. 2005 Mar;208(Pt 6): 1045-52.

Furue M, Okamoto T, Hayashi Y, Ohkochi H, Fujimoto M, Abe H, Ohnuma K, Sato GH, Asashima M, Sato JD. LIF as an anti-apoptotic mitogen for pluripotent mouse ES cells in a serum-free medium without feeder cells. In Vitro Cell Devel Biol. 2005;41: 19-28.

Genovese G, Ortiz N, Urcola MR, Luquet CM. Possible role of carbonic anhydrase, V-H(+)-ATPase, and Cl(-)/HCO(3)(-) exchanger in electrogenic ion transport across the gills of the euryhaline crab, Chasmagnathus granulatus. Comp Biochem Physiol A Mol Integr Physiol. 2005 Nov;142(3): 362-369.

Henry RP. Critical salinity, sensitivity, and cimmitment of salinity-mediated carbonic anhydrase induction in the gills of two euryhaline species of decapod crustaceans. J Exp Zool A Comp Exp Biol. 2005 Jan 1;303(1): 45-56.

Hill WG, Southern NM, MacIver B, Potter E, Apodaca G, Smith CP, Zeidel ML. Isolation and characterization of the Xenopus oocyte plasma membrane: a new method for studying activity of water and solute transporters. Am J Physiol Renal Physiol. 2005 Jul;289(1): F217-24.

Kidder GW, Baldwin J*, Golsmith C*, Petersen CW, Preston RL. Aerial development in Fundulus heteroclitus embryos. Intg and Comp Biol. 2005;44: 582.

Kidder GW, Petersen CW, Preston RL. Energetics of osmoregulation: I) Oxygen consumption by Fundulus heteroclitus. Jour. Exptl. Zool. 2006; 305A:309-317.

Kidder GW, Petersen CW, Preston RL. Energetics of osmoregulation: II) Water flux and osmoregulatory work in the euryhaline fish, Fundulus heteroclitus. Jour. Exptl. Zool. 2006; 305A:318-327.

Koomoa DT, Musch MW, Goldstein L. Osmotic stress stimulates the organic osmolyte channel in Xenopus leavis oocytes expressing skate (Raja erinacea) AE1. J Exp Zool. 2005;303A: 319-322.

Lenz PH, Hower AE*, Hartline DK. Temperatute compensation in the escape response of a marine copepod, Calanus finmarchicus (Crustacea). Biol Bull. 2005 Aug;209(1): 75-85.

Luquet CM, Weihrauch D, Senek M*, Towle DW. Induction of branchial ion transporter mRNA expression during acclimation to salinitiy change in the euryhaline crab, Chasmagnathus gradulatus. J Exp Biol. 2005 Oct:208(Pt 19): 3627-36.

Martinez AS, Wilson G, Phillips C, Cutler CP, Hazon N, Cramb G. Effects of cortisol on aquaporin expression in the oesophagus of the European eel, Anguilla anguilla. Annals. New York Acad. Sci. 2005; 1040:395-8.

Martinez AS, Cutler CP, Wilson G, Phillips C, Hazon N, Cramb G. Regulation of expression of two aquaporin homologues in the intestine of the European eel: effects of seawater acclimation and cortisol treatment. Am. J. Physiol. 2005; 288:R1733-43.

Martinez AS, Cutler CP, Wilson G, Phillips C, Hazon N, Cramb G. Cloning and expression of three aquaporin homologues from the European eel (Anguilla anguilla): effects of seawater acclimation and cortisol treatment on renal expression. Biol. Cell. 2005; 97:615-627.

McChesney PA, Elmore LW, Holt SE. Vertebrate marine species as model systems for studying telomeres and tolemerase. Zebrafish. 2005; 1:349-355.

Musch MW, Goldstein L. Tyrosine kinase inhibition affects skate anion exchanger isoform 1 alteration after volume expansion. Am. J. Physiol. Regul. Integr. Comp. Physiol. 2005; 288:885-890.

Notenboom S*, Miller DS, Kuik LH, Smits P, Russell FGM, Masereeuw R. Short-term exposure of renal proximal tubules to gentamicin increases long-term Mrp2 (ABCC2) transport function and reduces nephrotoxicant sensitivity. J Pharmacol Exp Therap. 2005;315: 912-920.

Pelis RM*, Edwards SL, Kunigelis SC, Claiborne JB, Renfro JL. Stimulation of renal sulfate secretion by metabolic acidosis requires Na+/H+ exchange induction and carbonic anhydrase. Am J Physiol Renal Physiol. 2005 Jul;289(1): F208-16.

Petersen CW, Salinas A*, Kidder GW, Preston RL. Reproductive ecology of Fundulus heteroclitus in a New England salt marsh. Intg and Comp Biol. 2005;44: 622.

Sandeman DC, Forrest S, Genco M*, Sullivan JM*, Benton JL, Beltz BS. Photoreceptive systems in crustacean and the entertainment of rhythmic adult neurogenesis. Society for Neuroscience Abstracts. 2005; 31: 366.3.

Scott GR, Claiborne JB, Edwards SL, Schulte PM, Wood CM. Gene expression after freshwater transfer in gills and opercular epithelia of killifish: insight into divergent mechanisms of ion transport. J Exp Biol. 2005 Jul;208(Pt 14): 2719-29.

Swiatecka-Urban A, Brown A, Moreau-Marquis S, Renuka J, Coutermarsh B, Barnaby R, Karlson KH, Flotte TR, Fukuda M, Langford GM, Stanton BA. The short apical membrane half-life of rescued Delta F508-cystic fibrosis transmembrane conductance regulator (CFTR) results from accelerated endocytosis of Delta F508-CFTR in polarized human airway epithelial cells. J Biol Chem. 2005;280:36762-72.

Swiatecka-Urban A, Moreau-Marquis S, Maceachran DP, Connolly JP, Stanton CR, Su JR, Barnaby R, O'Toole GA, Stanton BA. Pseudomonas aeruginosa inhibits endocytotic recycling of the cystic fibrosis transmembrane conductance regulator in polarized human airway epithelial cells. Am J Physiol Cell Physiol. 2005 Oct. [Epub ahead of print].

Towle DW, Smith C, and Wray CG. The American lobster EST sequencing project and implications for shell disease gene regulation studies. Proceedings Lobster Shell Disease Workshop, 2005; New England Aquarium, Aquatic Forum Series 05-1, 42-45.

Weber GJ, Choe SE, Dooley KA, Paffett-Lugassy NN, Zon LI. Mutant-specific gene programs in the zebrafish. Blood. 2005 Jul;106(2): 521-30.

Zhang Y, Hiraishi Y, Wang H, Sumi K, Hayashido Y, Toratani S, Kan M, Sato JD, Okamoto T. Constitutive activating mutation of the FGFR3b in oral squamous cell carcinomas. Int J Cancer. 2005;177: 166-168.


2004

Altmann SM, Mellon MT, Johnson MC, Paw BH, Trede NS, Zon LI, Kim CH. Cloning and characterization of an Mx gene and its corresponding promotor from the zebrafish, Danio rerio. Dev Comp Immunol. 2004 Apr;28(4): 295-306.

Bauer B, Hartz AM*, Fricker G, Miller DS. Pregene X receptor up-regulation of P-glycoprotein expression and transport function at the blood-brain barrier. Mol Pharmacol. 2004 Sep;66(3): 413-19.

Breen CM, Sykes DB, Baehr C, Fricker G, Miller DS. Fluorescein-methotrexate transport in rat choroid plexus analyzed using confocal microscopy. Am J Physiol Renal Physiol. 2004 Sep;287(3): F562-9. Epub 2004 May 04.

Chappe V, Hinkson DA, Howell LD, Evagelidis A, Liao J, Chang XB, Riordan JR, Hanrahan JW. Stimulatory and inhibitory protein kinase C consensus sequences regulate the cystic fibrosis transmembrane conductance regulator. Proc Natl Acad Sci USA. 2004 Jan 6;101(1): 390-5. Epub 2003 Dec 26.

Chen CY, Hathaway KM, Folt CL. Multiple stress effects of Vision herbicide, pH, and food on zooplankton and larval amphibian species from forest wetlands. Environ Toxicol Chem. 2004 Apr;23(4): 823-31.

Choe KP, O'Brien S, Evans DH, Toop T, Edwards SL. Immunolocalization of Na+/K+-ATPase, carbonic anhydrase II, and vacuolar H+-ATPase in the gills of freshwater adult lampreys, Geotria australis. J Exp Zoolog Part A Comp Exp Biol. 2004 Aug 1;301(8): 654-65.

Choe KP, Verlander JW, Wingo CS, Evans DH. A putative H+-K+-ATPase in the Atlantic stingray, Dasytatis sabina: primary sequence and expression in gills. Am J Physiol Regul Integr Comp Physiol. 2004 Oct;287(4): R981-91. Epub 2004 Jun 24.

Condliffe SB*, Zhang H, Frizzell RA. Synthaxin 1A regulates ENaC channel activity. J Biol Chem. 2004 Mar 12;279(11): 10085-92. Epub 2003 Dec 31.

Elferink RP, Ottenhoff R, Fricker G, Seward DJ*, Ballatori B, Boyer J. Lack of binary lipid excretion in the little skate, Raja erinacea, indicates the absence of functional Mdr2, Abcg5, and Abcg8 transporters. Am J Physiol Gastointest Liver Physiol. 2004 May;286(5): G762-8. Epub 2003 Dec 30.

Evans DH, Rose RE*, Roeser JM*, Stidham JD. NaCl transport across the opercular epithelium of Fundulus heteroclitus is inhibited by an endothelin to NO, superoxide, and prostanoid signaling axis. Am J Physiol Regul Integr Comp Physiol. 2004 Mar;286(3): R560-8. Epub 2003 Nov 20.

Fan L*, Alestrom A, Alestrom P, Collodi P. Development of cell cultures with competency for contributing to the zebrafish germ line. Crit Rev Eukaryot Gene Expr. 2004;14(1-2): 43-51. Review.

Fan L*, Alestrom A, Alestrom P, Collodi P. Production of zebrafish germline chimeras from cultured cells. Methods Mol Biol. 2004;254: 289-300.

Fellner SK, Parker LA*. Endothelin B receptor Ca2+ signaling in shark vascular smooth muscle: participation of ionsitol triphosphate and ryanodine receptors. J Exp Biol. 2004 Sep;207(Pt 19): 3411-7.

Fellner SK, Parker LA*. Ionic strength and the polyvalent cation receptor of shark rectal gland and artery. J Exp Zoology Part A Comp Exp Biol. 2004 Mar 1;301(3): 235-9.

Fricker G, Miller DS. Modulation of drug transporters at the blood-brain barrier. Pharmacology. 2004 Apr;70(4): 169-76. Review.

Genovese G, Luchetti C, Luquet C. Na+/K+-ATPase activity in the gills of the hyper-hypo-regulated crab Chasmagnathus granulatus acclimated to diluted, normal, and concentrated seawater. Marine Biology. 2004; 144(1):103-109.

Gentzsch M, Chang XB, Cui L, Wu Y, Ozols VV, Choudhury A, Pagano RE, Riordan JR. Endocytic trafficking routes of wild type and DeltaF508 cystic fibrosis transmembrane conductance regulator. Mol Biol Cell. 2004 Jun;15(6): 2684-96. Epub 2004 Apr 09.

Goodall CP, Bender RD, Broderick EJ, Bayne CJ. Constitutive differences in Cu/Zu superoxide dismutase mRNA levels and activity in hemocytes of Biomphalaria glabrate (Mollusca) that are either susceptible or resistant to Schistosoma mansoni (Trematoda). Mol Biochem Parasitol. 2004 Oct;137(2): 321-8.

Hagos Y, Burckhardt BC, Larsen A, Mathys C, Gronow T, Bahn A, Wolff NA, Burckhardt G, Steffgen J. Regulation of sodium-dicarboxylate cotransporter-3 from winter flounder kidney by protein kinase C. Amer J Physiol Renal Physiol. 2004 Jan;286(1): F86-93. Epub 2003 Sep 16.

Halperin J, Genovese G, Tresguerres M, Luquet CM. Modulation of ion uptake across posterior gills of the crab Chasmagnathus granulatus by dopamine and cAMP. Comp. Biochem. Physiol. 2004; 139(1): 103-109.

Hartz AM, Bauer B, Fricker G, Miller DS. Rapid regulation of P-glycoprotein at the blood-brain barrier by endothelin-1. Mol Pharmacol. 2004 Sep;66(3): 387-94.

Hill WG, Mathai JC, Gensure RH*, Zeidel JD*, Apodaca G, Saenz JP*, Kinne-Saffran E, Kinne R, Zeidel ML. Permeabilities of teleost and elasmobranch gill apical membranes: evidence that lipid bilayers alone do not account for barrier function. Am J Physiol Cell Physiol. 2004 Jul;287(1): C235-42. Epub 2004 Mar 03.

Huycke MM, Gaskins HR. Commensal bacteria, redox stress, and colorectal cancer: mechanisms and models. Exp Biol Med (Maywood). 2004 Jul;229(7): 586-97. Review.

Koomoa DL, Musch MW, Myers DE*, Goldstein L. Expression of the skate (Raja erinacea) AE1 osmolyte channel in Xenopus laevis oocytes: monovalent cation permeability. J Membr Biol. 2004 Mar 1;198(1): 23-9.

Mattingly CJ, Colby GT, Rosenstein MC, Forrest JN, Boyer JL. Promoting comparative molecular studies in environmental health research: an overview of the comparative toxicogenomics database (CTD). Pharmacogenomics J. 2004;4(1): 5-8. Review.

Miller DS. Confocal imaging of xenobiotic transport across the choroid plexus. Adv Drug Deliv Rev. 2004 Oct 14;56(12): 1811-24.

Musch MW, Goldstein L. Tyrosine kinase inhibition affects skate anion exchanger isoform I alterations after volume expansion. Am J Physiol Regul Integr Comp Physiol. 2004 Nov 11; [Epub ahead of print]

Musch MW, Koomoa DL, Goldstein L. Hypotonicity-induced exocytosis of the skate anion exchanger skAE1: role of lipid raft regions. J Biol Chem. 2004 Sep 17;279(38): 39447-53. Epub 2004 Jul 16.

Notenboom S*, Miller DS, Smits P, Russel FG, Masereeuw R. Involvement of guanylyl cyclase and cGMP in the regulation of Mrp2-mediated transport in the proximal tubule. Am J Physiol Renal Physiol. 2004 Jul;287(1): F33-8. Epub 2004 Feb 17.

Ossum CG, Hoffman EK, Vijayan MM, Holt SE, Bols NC. Isolation and characterization of a novel fibroblast-like cell line from the rainbow trout (Oncohynchus mykiss) and a study of Ip39MAPK activation and induction of Hsp70 in response to chemically-induced ischemia. Jour. of Fish Bio. 2004; 64:1103-1116.

Paffett-Lugassy NN, Zon LI. Analysis of hematopoietic development in the zebrafish. Methods Mol Med. 2004;105: 171-98.

Pannabecker TL, Dantzler WH. Three-dimensional lateral and vertical relationships of inner medullary loops of Henle and collecting ducts. Am J Physiol Renal Physiol. 2004 Oct; 287(4): F767-74. Epub 2004 Jun 08.

Pannabecker TL, Abbott DE, Dantzler WH. Three-dimensional functional reconstruction of inner medullary thin limbs of Henle's loop. Am J Physiol Renal Physiol. 2004 Jan; 286(1): F38-45. Epub 2003 Sep 30.

Perlman DF, Goldstein L. The anion exchanger as an osmolyte channel in the skate erythrocyte. Neurochem Res. 2004 Jan;29(1): 9-15.

Riordan JR. Assembly of functional CFTR chloride channels. Annu Rev Physiol. 2004 Nov 1; [Epub ahead of print]

Rosenberg MF, Kamis AB, Aleksandrov LA, Ford RD, Riordan JR. Purification and crystallization of the cystic fibrosis transmembrane conductance regulator (CFTR). J Bio Chem. 2004 Sep 10;279(37); 39051-7. Epub 2004 Jul 09.

Scott Gr, Richards JG, Forbush B, Isenring P, Schulte PM. Changes in gene expression in gills of the euryhaline killifish, Fundulus heteroclitus, after abrupt salinity transfer. Am J Physiol Cell Physiol. 2004 Aug;287(2): C300-9. Epub 2004 Mar 24.

Straub PF, Higham ML*, Tanguy A, Landau BJ, Phoel WC, Hales LS Jr, Thwing TK. Suppression subtractive hybridization cDNA libraries to identify differentially expressed genes from contrasting fish habitats. Mar Biotechnol (NY). 2004 Jul-Aug;6(4): 386-99. Epub 2004 Aug 06.

Weihrauch D, Morris S, Towle DW. Ammonia excretion in aquatic and terrestrial crabs. J Exp Biol. 2004 Dec 15;207(Pt 26): 4491-504.

Wildt M, Goergen EM, Benton JL, Sandeman DC, Beltz BS. Regulation of serotonin levels by multiple light-entrainable endogenous rhythms. J Exp Biol. 2004 Oct;207(Pt 21): 3765-74.

Wise SS, Elmore LW, Holt SE, Little JE, Antonucci PG*, Bryant BH*, Wise JP Sr. Telomerase-mediated lifespan extension of human bronchial cells does not affect hexavalent chromium-induced cytotoxicity or genotoxicity. Mol Cell Biochem. 2004 Jan;255(1-2): 103-11.

Ziegler A, Weihrauch D, Hagedorn M, Towle DW, Bleher R. Expression and polarity reversal of V-type H+-ATPase during the mineralization-demineralization cycle in Porcellio scaber sternal epithelial cells. J Exp Biol. 2004 Apr;207(Pt 10): 1749-56.

Zoetendal EG, Collier CT*, Koike S, Mackie RI, Gaskins HR. Molecula ecological analysis of the gastrointestinal microbiota: a review. J Nutr. 2004 Feb;134(2): 465-72. Review.

 

 

 

 

 


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